dc.contributor.author | Özgün, Gülşah | en_US |
dc.contributor.author | Karagüler, Nevin Gül | en_US |
dc.contributor.author | Turunen, Ossi | en_US |
dc.contributor.author | Turner, Nicholas J. | en_US |
dc.contributor.author | Binay, Barış | en_US |
dc.date.accessioned | 2019-10-29T17:32:25Z | |
dc.date.available | 2019-10-29T17:32:25Z | |
dc.date.issued | 2015 | |
dc.identifier.issn | 1381-1177 | |
dc.identifier.issn | 1873-3158 | |
dc.identifier.uri | https://dx.doi.org/10.1016/j.molcatb.2015.09.014 | |
dc.identifier.uri | https://hdl.handle.net/20.500.12294/1756 | |
dc.description | WOS: 000366078800026 | en_US |
dc.description | Binay, Barış (Arel Author) | en_US |
dc.description.abstract | NAD(+)-dependent formate dehydrogenase (FDH) enzyme catalyses the NAD(P)(+)-dependent interconversion of formate anion to carbon dioxide coupled with the conversion of NAD(P)(+) to NAD(P)H. NADH is widely used as cofactor by enzymes utilized in the biocatalytic synthesis of chiral pharmaceutical intermediates and chemical compounds. For this reason, FDH is used in the enzymatic synthesis of optically active prochiral carbonyl compounds in order to regenerate the NADH. For wider applicability in industrial usage of FDH, there is a demand for higher stability of the enzyme. We report here the overexpression in Escherichia coli and subsequent characterization of FDH from thermophilic fungus Chaetomium thermophilum (CtFDH). CtFDH was found to be more acidic than the typical FDHs from various sources, having its optimum at pH 5, and it also showed moderate thermostability at pH 5. The modelling of the enzyme and formate in the active site indicated that the enzyme functions with metal-independent hydride shift in the same way as the other NAD(+)-dependent FDHs of this enzyme group. Dimer interface properties were also analyzed. CtFDH shows potential being a template for engineering higher thermostability for applications in acidic conditions. (C) 2015 Elsevier B.V. All rights reserved. | en_US |
dc.description.sponsorship | TUBITAK [214Z064]; COST Action [CM1303] | en_US |
dc.description.sponsorship | This work was supported by a grant from the TUBITAK (grant number: 214Z064), COST Action CM1303 "Systems Biocatalysis" and special thanks to Prof. Dr. Ed Hurt from Heidelberg University for the strain of C thermophilum. | en_US |
dc.language.iso | eng | en_US |
dc.publisher | ELSEVIER SCIENCE BV | en_US |
dc.relation.ispartof | Journal of Molecular Catalysis B-Enzymatic | en_US |
dc.identifier.doi | 10.1016/j.molcatb.2015.09.014 | en_US |
dc.identifier.doi | 10.1016/j.molcatb.2015.09.014 | |
dc.rights | info:eu-repo/semantics/closedAccess | en_US |
dc.subject | NAD(+)-dependent acidic formate dehydrogenase | en_US |
dc.subject | Chaetomium thermophilum | en_US |
dc.subject | Thermostability | en_US |
dc.subject | Biochemical and kinetic characterization | en_US |
dc.subject | Computational modeling | en_US |
dc.title | Characterization of a new acidic NAD(+)-dependent formate dehydrogenase from thermophilic fungus Chaetomium thermophilum | en_US |
dc.type | article | en_US |
dc.department | İstanbul Arel Üniversitesi, Fen-Edebiyat Fakültesi, Moleküler Biyoloji ve Genetik Bölümü | en_US |
dc.identifier.volume | 122 | en_US |
dc.identifier.startpage | 212 | en_US |
dc.identifier.endpage | 217 | en_US |
dc.relation.publicationcategory | Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı | en_US |
dc.department-temp | [Ozgun, Gulsah -- Karaguler, Nevin Gul] Istanbul Tech Univ, Fac Sci & Letters, Dept Mol Biol & Genet, TR-34469 Istanbul, Turkey -- [Ozgun, Gulsah -- Karaguler, Nevin Gul] Istanbul Tech Univ, Mol Biol Biotechnol & Genet Res Ctr MOBGAM, TR-34469 Istanbul, Turkey -- [Turunen, Ossi] Aalto Univ, Sch Chem Technol, Dept Biotechnol & Chem Technol, FI-00076 Aalto, Finland -- [Turner, Nicholas J.] Univ Manchester, Manchester Inst Biotechnol, Sch Chem, Manchester M1 7DN, Lancs, England -- [Binay, Baris] Istanbul AREL Univ, Mol Biol & Genet, TR-34537 Istanbul, Turkey | en_US |